That wasn't the question

Basically if air is getting into the fuel line/fuel filter etc. before the high pressure pump, then on start up it may fire up and then stumble and misfire until it draws clean air free fuel into the pump and onto the injectors.
If you still have the Snap On tool look for the Common Rail line pressure, when cranking from cold it should be above 230Bar roughly 3500 psi just turning the starter and then go smoothly up with no hiccups as you rev the engine.
Any drops when cranking or when just started would be suspicious.
So a poor seal on the fuel filter or fuel line connectors can be an issue.